IGR | Publications

CHIP-seq and transcriptomics reveal a new role of circadian-regulated StBBX24 protein in potato reproduction

Grądzka K., Biegańska M., Koczyk G., Młodzińska A., Pawłowicz I., Kiełbowicz-Matuk A. (2025). BMC Plant Biology. 25: 1702. DOI: 0.1186/s12870-025-07811-0

Extraction of Lipids from Natural Saline Mud and their Interpretation from Point of Biological Activity in the Context of Salt Lakes of North-East Kazakhstan

Mussabayeva B., Akimzhanova K., Sabitova A., Ydyrys A., Kruszka D., Cerazy-Waliszewska J., Łęska B., Tabisz Ł. (2025). Engineered Science. 36: 1628. DOI: 10.30919/es1628

Intergenerational and horizontal transmission of wheat endophytic fungi

Salamon S., Mikołajczak K., Basińska-Barczak A., Banachewicz P., Błaszczyk L. (2025). Scientific Reports. 15: 42275. DOI: 10.1038/s41598-025-26280-x

The draft genome assembly and annotation of allotetraploid Festuca glaucescens

Pawłowicz I., Kopeć P., Kosmala A. (2025). BMC Plant Biology. 1590. DOI: 10.1186/s12870-025-07558-8

From Stress to Recovery: Divergent Chilling Responses in Contrasting Miscanthus sinensis Genotypes

Sobańska, K., Głowacka K.; Krajewski P., Wojtkowiak E., Nuc M., Basińska-Barczak A., Czyż K. Waligórski P., Kruszka K., Gabała E., Grzywaczyk A., Zborowska M., Drożdżyńska A., Mokrzycka M., Koczyk G., Cerazy-Waliszewska J., Milewska-Hendel A., Betekhtin A., Pniewski T. (2025). GCB Bioenergy. 17(12): 1757-1707. DOI: doi.org/10.1111/gcbb.70087

Expression Profiling and Interaction Effects of Three R-Genes Conferring Resistance to Blackleg Disease in Brassica napus

Niemann J., Starosta E., Kaczmarek J., Pawłowicz I., Bocianowski J. (2025). Applied Sciences. 15(21): 11613. DOI: 10.3390/app152111613

Agroecological genomics and participatory science: optimizing crop mixtures for agricultural diversification

Santamarina Ch., Mathieu L., Bitocchi E., Pieri A., Bellucci E., Di Vittori V., Susek K., Scossa F., Nanni L., Papa R (2025). Trends in Plant Science. DOI: 10.1016/j.tplants.2025.04.008

Composition of fatty acids in hemp leaves (Cannabis sativa L.) under the impact of aphids and a herbicide

Durak R., Borowiak-Sobkowiak B., Szpyrka E., Durak T., Ciak B., Jędryczka M., (2025). Journal of Plant Protection Research. 65(2): 241–254. DOI: 10.24425/jppr.2025.155051

Functionalized Material-Based Flexible Biomedical Devices

Shet S.M., Mondal D., Nataraj S.K. (2025). Chapter: Functionalized Nanomaterials for Electronic and Optoelectronic Devices: Design, Fabrications and Applications. 461–489. DOI: 10.1002/9781394214105.ch15

Interfungal antagonism between Trichoderma and Fusarium proliferatum — metabolomic and DNA-based analyses

Modrzewska M., Popowski D., Błaszczyk L., Stępień Ł., Waśkiewicz A., Urbaniak M., Bryła M. (2025). Journal of Applied Genetics. DOI: 10.1007/s13353-025-01014-x

Genome-Wide Identification of WRKY Transcription Factors in Pea (Pisum sativum L.) and their Response to Sulfur and Water Stress

Kumar P., Alok A., Kaur K., Gawłowska M., Tiwari S., Singh H., Święcicki W. K., Awasthi P. (2025). Plant Molecular Biology Reporter. 43(2): 674-687. DOI: 10.1007/s11105-024-01498-7

Genetic mapping of agronomically important traits in einkorn wheat

Lampar A., Lněničková H., Antalová Z., Balcárková B., Sedláček T., Janáková E., Barabaschi D., Korol A., Dvořáček V., Škopová M., Tulpová Z., Korchanová Z., Majka M., Juračka J., Bartoš J., Doležel J., Valárik M. (2025). Crop Science. 65(4). DOI: 10.1002/csc2.70123

Can In Vitro Cell Cultures of Eryngium planum, Lychnis flos-cuculi, and Kickxia elatine Be an Alternative Source of Plant Biomass with Biological Antimicrobial and Anti-Acanthamoeba Activities?

Hermosaningtyas A. A., Budzianowska A., Kruszka D., Derda M., Długaszewska J., Kikowska M. (2025). Applied Sciences. 15(15). DOI: 10.3390/app15158292

Circular valorization of Hypericum perforatum biomass into CuO-lignin and CuO-cellulose bionanocomposites for mitigating copper nanotoxicity in plants

Saxena M., Muthukrishnan L., Matam P., Selvakesavan R. K., Franklin G., Mondal D. (2025). International Journal of Biological Macromolecules. 321(Pt 3): 146474. DOI: 10.1016/j.ijbiomac.2025.146474

Block covariance matrix estimation with structured off-diagonal blocks

Mokrzycka M., Mrowińska M. (2025). Statistical Papers. 66. DOI: 10.1007/s00362-025-01736-4

Agrobacterium tumefaciens-induced proteomic remodelling and physiological adaptations in Hypericum perforatum L

Shakya P., Selvakesavan R.K., Perlikowski D., Anthonydhason V., Kiirika L., Franklin G. (2025). Plant Stress. 18. DOI: 10.1016/j.stress.2025.100986

Reassessing data management in increasingly complex phenotypic datasets

Pommier C., Alic I., Cabrera-Bosquet L., Draye X., Neveu P., Reif J. C., Robbins K. R., Krajewski P., Tardieu F. (2025). Trends in Plant Science. DOI: 10.1016/j.tplants.2025.09.001

Establishment and phenotypic characterization of genetically diverse core collections of Lupinus albus

Tanwar U., Tomaszewska M., Czepiel K., Neji M., Jamil H., Rocchetti L., Pieri A., Bitocchi E., Bellucci E., Pipan B., Meglič V., Oppermann M., Kroc M., Papa R., Susek K. (2025). BMC Plant Biology. 25(1): DOI: 10.1186/s12870-025-07115-3

Efficient protoplast isolation and transfection for CRISPR/Cas9-based genome editing in pea (Pisum sativum L.)

Singh H., Kumar P., Singh J., Swiecicki W. K., Jędryczka M., Gawłowska M., Tiwari S. (2025). Plant Cell Tiss Organ Cult. 163: 12. DOI: 0.1007/s11240-025-03198-w

Effect of arsenic speciation on growth, physiology, and bioethanol yield in two Miscanthus ×giganteus genotypes

Cerazy-Waliszewska J., Wojciechowska Z., Białas W., Mleczek M., Niedzielski P., Proch J., Pniewski T. (2025). Journal of Environmental Management. 394: DOI: 10.1016/j.jenvman.2025.127343

Nitric oxide regulates photosynthesis and the capacity of the antioxidant system under water deficit and rehydration in Lolium multiflorum/Festuca arundinacea introgression forms

Perlikowski D., Lechowicz K., Blicharz S., Arasimowicz-Jelonek M., Czapiewska A., Pawlowicz I., Kosmala A. (2025). Frontiers in Plant Science. 16: DOI: 10.3389/fpls.2025.1652482

Clubroot Disease: 145 Years Post-Discovery, Challenges, and Opportunitie

Adhikary D., Ul Islam A., Adhikari S., Chapara V., Truman W., Ludwig-Müller J. (2025). Annual Review of Phytopathology. 16: DOI: 10.1146/annurev-phyto-121323-020949

Molecular Mechanisms of Dual Potato Reproduction

Kasprzewska A., Basińska-Barczak A. (2025). Physiologia Plantarum. DOI: 10.1111/ppl.70451

Enhanced micropropagation of Miscanthus × giganteus: a sustainable approach to optimal regenerated plant growth

Wojtkowiak E., Czyż K. B., Basińska-Barczak A., Pudelska H., Głowacka K., Pniewski T., Sobańska K. (2025). Plant Cell Tissue and Organ Culture. 162(2): DOI: 10.1007/s11240-025-03102-6

Identification of a new QTL associated to reduced quinolizidine alkaloid content in white lupin (Lupinus albus, L.) and development of ultra-low alkaloid recombinants by stacking with the pauper allele

Patyi A., Kamp M., Arncken C., Biazzi E., Książkiewicz M., Messmer M. M., Schneider M., Tava A., Lazzaro M. (2025). BMC Plant Biology. 25: 945. DOI: 10.1186/s12870-025-06951-7

Biotechnology Production of Cell Biomass from the Endangered

Aliesa Hermosaningtyas A., Totoń E., Budzianowska A., Lisiak N., Romaniuk-Drapała A., Kruszka D., Rewers M., Kikowska M. (2025). Biomedicines. 13: 1382. DOI: 10.3390/biomedicines13061382

New potential biomarkers of ulcerative colitis and disease course — integrated metagenomic and metabolomic analysis among Polish patients

Zakerska-Banaszak O., Ladziak K., Kruszka D., Maciejewski K., Wolko Ł., Krela-Kazmierczak I., Zawada A., Vibeke Vestergaard M., Dobrowolska A., Skrzypczak-Zielinska M. (2025). Journal of Gastroenterology. DOI: 10.1007/s00535-025-02280-6

Evaluation of the Global White Lupin Collection Reveals Significant Associations Between Homologous FLOWERING LOCUS T Indels and Flowering Time, Providing Validated Markers for Tracking Spring Ecotypes Within a Large Gene Pool

Bielski W., Surma A., Książkiewicz M., Rychel-Bielska S. (2025). International Journal of Molecular Sciences. 26(14): 6858. DOI: 10.3390/ijms26146858

Molecular dissection of the genetic architecture of phenology underlying Lupinus hispanicus early flowering and adaptation to winter- or spring sowing

Bielski W., Surma A., Belter J., Kozak B., Książkiewicz M., Rychel-Bielska S. (2025). Scientific Reports. 15(1): 15324. DOI: 10.1038/s41598-025-00096-1

Inoculum and Inoculation Techniques: Key Steps in Studying Pathogenicity and Resistance to Sclerotinia stem rot in Oilseed rape

Nazanin Zamani-Noor N., Jędryczka M. (2025). Frontiers in Plant Science. 16: DOI: 10.3389/fpls.2025.1610049

Endophytic fungal communities of Calicotome spinosa—an important medicinal plant of Tizi‑Ouzou (Algeria)

Zareb A., Banachewicz P., Havrysh P., Błaszczyk L., Hammad T., Meftah C., Salamon S. (2025). Journal of Applied Genetics. DOI: 10.1007/s13353-025-00980-6

Hop (Humulus lupulus L.) Phenolic Compounds Profile Depends on Cultivar and Plant Organ Maturity

Piekara J., Piasecka-Kwiatkowska D., Hołaj H., Jędryczka M., Daramola O.D.,Dwiecki K. (2025). Molecules. 30(11): 2365. DOI: 10.3390/molecules30112365

Decreased DMI sensitivity of Plenodomus biglobosus (phoma of oilseed rape) associated with CYP51 substitution G476S

King K.M., González-Rodríguez L.M., Kaczmarek J., Jędryczka M., West J.S. (2025). Pest Management Science. DOI: 10.1002/ps.8926

PHLOEM EARLY DOFs (PEARs) are induced within clubroot galls as a consequence of cambial stimulation and vascular reprogramming during Plasmodiophora brassicae infection in Arabidopsis thaliana

Singh D., Blicharz S., Roszak P., Helariutta Y., Malinowski R. (2025). Journal of Experimental Botany. DOI: 10.1093/jxb/eraf225

The unexplored diversity of rough-seeded lupins provides rich genomic resources and insights into lupin evolution

Susek K., Vincenzi L., Tomaszewska M., Kroc M., Franco E., Cosentino E., Limongi A. R., Tanwar U.K., Jamil H., Nelson M. N., Bayer P. E., Edwards D., Papa R., Delledonne M. & Jackson A. A. (2025). Nature Communications. 16: 4358 (2025). DOI: 10.1038/s41467-025-58531-w

Melatonin in crop plants: from biosynthesis through pleiotropic effects to enhanced stress resilience

Michałek M., Ogrodowicz P. , Kempa M. , Kuczyńska A., Mikołajczak K. (2025). Journal of Applied Genetics. DOI: 10.1007/s13353-025-00963-7

Development and validation of PCR marker array for molecular selection towards spring, vernalization-independent and winter, vernalization-responsive ecotypes of white lupin (Lupinus albus L.)

Surma A., Książkiewicz M., Bielski W., Kozak B., Galek R., Rychel-Bielska S. (2025). Scientific Reports. 15(1): DOI: 10.1038/s41598-025-86482-1

Recent Advances in Molecular Tools and Pre-Breeding Activities in White Lupin (Lupinus albus)

Tosoroni A., Di Vittori V., Nanni L., Musari E., Papalini S., Bitocchi E., Bellucci E., Pieri A., Ghitarrini S., Susek K., Papa R. (2025). Plants. 14(6). DOI: 10.3390/plants14060914

Coenzyme M: An Archaeal Antioxidant as an Agricultural Biostimulant

H. Brown J., Vijayan J., Rodrigues de Queiroz A., Figueroa Ramos N., Bickford N., Wuellner M., Buan N., Stone J. M., Głowacka K., Roston R.L. (2025). Antioxidants. DOI: 10.1101/2024.12.20.629737

Disorders in brassinosteroids signal transduction triggers the profound molecular alterations in the crown tissue of barley under drought

Kuczyńska A., Michałek M., Ogrodowicz P., Kempa M., Krajewski P., Cardenia V., Rodriguez-Estrada M.T., Pérez-Llorca M., Munné-Bosch S., Mikołajczak K. (2025). PLOS One. 20(2): DOI: 10.1371/journal.pone.0318281

Beauveria felina Accelerates Growth When Competing With Other Potential Endophytes

Pijanowski W., Chmielewski S., Wysoczański W., Havrysh P., Turnau K., Lembicz M. (2025). Environmental Microbiology Reports. 17(1): DOI: 10.1111/1758-2229.70067

Molecular selection of soybean towards adaptation to Central European agroclimatic conditions

Rychel-Bielska S., Książkiewicz M., Kurasiak-Popowska D., Tomkowiak A., Bielski W., Weigt D., Niemann J., Surma A., Kozak B., Nawracała J. (2025). Journal of Applied Genetics. 66 (1): DOI: 10.1007/s13353-024-00889-6

Genetic diversity of Cucurbita maxima accessions representing the Eastern European gene pool

Kaźmińska K., Mokrzycka M., Słomnicka R., Korzeniewska A., Bartoszewski G. (2025). Genetic Resources and Crop Evolution. DOI: 10.1007/s10722-025-02362-7

Genetic Basis of Non-Photochemical Quenching and Photosystem II Efficiency Responses to Chilling in the Biomass Crop Miscanthus

Kumari A., Njuguna J.N., Zheng X., Kromdijk J., Sacks E.J., Głowacka K. (2025). GCB Bioenergy. 17(1): DOI: 10.1111/gcbb.70015

Jasmonate Responsive SlnsLTP Confers Resistance Against Botrytis cinerea and Verticillium dahliae in Tomato

Panda S. , Singh N.C. , Sonawane P.D. , Meir S. , Kamble A. (2025). Journal of Plant Growth Regulation. DOI: 10.1007/s00344-025-11684-w

Host Metabolites in Asparagus–Fusarium Interaction: Mechanisms and Regulation

Enow E.A., Urbaniak M., Stępień Ł. (2025). Plant Pathology. 74(1): 923-942. DOI: 10.1111/ppa.14083

Exploring chilling stress and recovery dynamics in C4 perennial grass of Miscanthus sinensis

Sobańska K., Mokrzycka M., Przewoźnik M., Pniewski T., Głowacka K. (2025). PLOS One. 20(1). DOI: 10.1371/journal.pone.0308162

Laser dissection-assisted phloem transcriptomics highlights the metabolic and physiological changes accompanying clubroot disease progression in oilseed rape

Blicharz S., Stefanowicz K., Truman W., Basińska-Barczak A., Singh D., Kasprzewska A., de Diego N., Vrobel O., Zeljkovic S. C., Tarkowski P., Malinowski R. (2025). The Plant Journal. 121 (1). DOI: 10.1111/tpj.17156

Publications 2025